Chromoviruses
WebThe preferential insertion of chromoviruses in heterochromatin via their chromodomains might have favored their diversification and enrichment. Our phylogenetic analyses of LTR retrotransposons from Orobanchaceae also revealed that the Bianca clade of Ty1/Copia and the SMART-related elements are much more widely distributed among angiosperms ... WebJun 1, 2004 · The evolutionary history and dynamics of chromoviruses can be explained simply by strict vertical transmission in plants, followed by more complex evolution in …
Chromoviruses
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WebBACKGROUND: Long terminal repeat (LTR) retrotransposons are widespread in plant genomes and play a large role in the generation of genomic variation. Despite this, their identification and characterization remains challenging, especially for WebChromoviruses, chromodomain-containing retrotransposons, are the only Metaviridae (Ty3/ gypsy group of retrotransposons) clade with a Eukaryota-wide distribution. They have a …
WebIn Ty3-gypsy LTR retrotransposons, tandem repeats were detected both in non-chromoviruses and chromoviruses, yet to a different extent. Non-chromovirus Tat and chromoviruses harbored tandem repeats both within the LTRs and UTRs, whereas non-chromovirus Athila had tandem repeats only embedded within the UTR adjacent to the … WebOne of them, the chromoviruses, has a wider host range, being found in plants, fungi and vertebrates. Chromoviruses got their name because their pol gene encodes an integrase with a chromodomain (‘chromatin organization modifier domain’), a nucleosome-binding integrase portion which can mediate sequence specific integration ([10,13-15].
WebThe chromoviruses are Ty3/gypsy retrotransposons with chromodomains at their integrase C termini. Chromodomains are logical determinants for targeting to heterochromatin, … WebMar 1, 2013 · Results. We conducted a comprehensive survey of chromoviruses within the Beta vulgaris (sugar beet) genome, and found a highly diverse chromovirus population, with significant differences in element size, primarily caused by their flanking LTRs. In total, we identified and annotated full-length members of 16 families belonging to the four plant …
WebPhylum. Class. Order. Suborder. Superfamily. Family. Species. Number of Sequences.; Chordata Reptilia Squamata Scleroglossa Colubroidea Viperidae Vipera ammodytes
WebNov 2, 2009 · Chromoviruses are thus putative markers of ancient interactions between plants and fungi. Interestingly, while chromoviruses spread among vertebrates, they … grocery stores morris ilWebMay 19, 2012 · One of the most unexpected insights that followed from the completion of the human genome a decade ago was that more than half of our DNA is derived from transposable elements (TEs). Due to advances in high throughput sequencing technologies it is now clear that TEs comprise the largest molecular class within most metazoan … file for spouse social security benefitsWebMar 1, 2013 · Background Chromoviruses are one of the three genera of Ty3-gypsy long terminal repeat (LTR) retrotransposons, and are present in high copy numbers in plant genomes. They are widely distributed... grocery stores montclair caWebMar 14, 2005 · Chromoviruses (Marin and Llorens, 2000; Fig. 2) are the most widespread clade of Metaviridae, since they are present in the genomes of plants, fungi and … grocery stores morgan city laWebNational Center for Biotechnology Information grocery stores montrose laWebJan 22, 2004 · Chromoviruses in the key Amniota lineage, the reptiles, have been analyzed by PCR to explain their evolutionary dynamics in amniotes. Phylogenetic analyses provide evidence for a novel centromere-specific chromoviral clade that is widespread and highly conserved in all seed plants. grocery stores moriarty nmfile for ssd online